Saturday, August 11, 2018

Using Kali Linux behind Whonix in VirtualBox

 After adding Kali Linux and Whonix in VirtualBox, do the following:
  1. Start Whonix VM
  2. Update Whonix VM
  3. Run Whonix Check
  4. Change Network Settings of Kali to "Internal Network". Choose WhonixNet.
  5. Boot Kali and change the network settings.
    1. #ifconfig eth0 10.152.152.11
    2. #route add default gw 10.152.152.10
  6. Open check.torproject.org in a browser in Kali

Wednesday, July 25, 2018

Midyear AY 2017-2018

This midyear we hosted two practicum students, Quinn and Bianca, to work on the data processing part of Project Odette. Project Odette is part of Miyah's thesis which aims to develop an automatic surface vehicle(ASV) for lake water quality sensing. I re-learned a few technologies during the period including the following:
  • NodeJS
  • Git/Github
  • ReactJS
  • ExpressJS
  • REST API
  • MySQL/PHPMyAdmin
  • Docker and Docker Compose
  • Android Programming/Android Studio
  • Google Map API 
  • Nginx/Reverse Proxy
I realized that I am more productive when working in a team, especially if the members are talented and motivated. I was also impressed by Miyah's project management skills. As with any software dev projects, the main challenge is the continuous change in requirements. Agile methodologies are highly recommended for these kinds of projects.

Tuesday, April 17, 2018

Memory and Linux Processes

Physical Memory and Virtual Memory

The CPU of the computer is responsible for executing instructions (machine code). These instructions, as well as the data used by these instructions, should be placed in the physical memory (which is on the actual memory chip).  Each byte in the physical memory is accessed through a physical address. The physical address is placed in the memory address register (MAR) when writing or reading to/from memory. The size of the MAR and address bus determine the range of addresses that can be used. For example, if MAR is 32 bits, then addresses from 0 to 0xFFFFFFFF (up to 4GB) can be accessed.

Image result for Memory Address Register image
(https://archive.cnx.org/contents/6876272b-9b8f-463c-848b-1d388dccf776@1/module-5)


Modern computer architectures however provide a virtual or logical memory view to the CPU. The CPU accesses each byte through a virtual or logical address. The range of virtual addresses is usually the same as the range of the physical addresses, although the actual amount of physical memory may be less or more than the addressable range.

Virtual addresses must eventually be translated to physical addresses to access instructions and data from the physical memory. This translation/mapping is technically called address binding. The translation is performed by the Memory Management Unit (MMU) hardware component. Schemes such as segmentation and/or paging are often used to support different features and needs, such as protection . The operating system also performs some operations related to this address translation by invoking specialized CPU instructions.


(https://upload.wikimedia.org/wikipedia/commons/thumb/d/dc/MMU_principle_updated.png/325px-MMU_principle_updated.png)


Application programmers need only to concern themselves with the virtual memory. Kernel developers, however, need to be concerned with both virtual and physical memory as part of implementing the memory management component of the operating system.

Having a virtual memory view provides flexibility, especially in multiprogramming and timesharing operating systems. It allows a process to "believe" that it has exclusive and full access to the entire physical memory, even though it does not. Also, virtual memory allows processes to access code and data that are in secondary storage (disk) as if they are in physical memory through a scheme called swapping.

Process Memory Map in Linux (Ubuntu 16.04 x86_64, GCC 5.4.0)

When writing C programs, variables are used to hold data and functions are used to implement operations. The variables and functions have names, which are symbolic. In compiler design, names are generally called symbols. Consider a payroll program, the variable named age can be used to hold the age of an employee. Also, the function named compute_salary can be used to perform the operation of computing the salary of an employee.

When a C program is compiled and linked, the variables and functions are converted to memory locations/addresses(in virtual memory) and machine code(object code) respectively.  Variable names and function names become memory addresses and are stored in a symbol table. The result of this conversion is stored in an executable file (aka program binary image). The executable file is what is usually run. Executable file format is usually dependent on the operating system. In Linux for example, ELF is the standard format for executable files.

Running a program actually means the loader reading the executable file and creating a process for it. When the executable file is loaded by the operating system for execution, for example via the exec() system call in Linux, the operating system allocates a portion of memory in an area dedicated for user processes.  The data and instructions are read from the executable file and placed in the allocated memory in locations which are also specified(in the symbol table) from  the executable file. Again, it is emphasized that the memory locations being referred to here is in virtual memory. Once the data and instructions are in memory, a new process control block(PCB) is created representing the process. The allocated memory becomes the process' memory map or address space and is usually a field in the PCB. The process is then scheduled for execution.

A process' memory map is divided into sections which serve different purposes. A typical memory map is shown below. The text section for instructions, the data section for initialized data, the bss section for uninitialized data, the stack section for function calls (and traditionally, parameters), and the heap section for dynamically allocated memory (via the function malloc()). Some of these sections are already defined during the compilation and linking process. Although it appears below that the memory is contiguous in virtual memory, it may not be the case in the corresponding physical memory.

(https://www.hackerearth.com/practice/notes/memory-layout-of-c-program/)
The example C program below will illustrate in what section of a process' memory map the different symbols are placed. Download binding.c, create an object file and executable file [1]. Run the executable several times and observe which variables change in address. The variables are so named to show in which section they will reside.

Compile time (output is object file):
$ gcc -fno-common -c -o binding.o binding.c

Link time (output is executable file):
$ gcc -fno-common -o binding.exe binding.c

Run time (a process is created) :
$ ./binding.exe

Next, examine the symbol table of the object file and the executable file. The first column refers to the assigned address and the fourth column refers to the assigned section.
$ objdump -t binding.o 
$ objdump -t binding.exe

Compare the entries for some of the symbols in the object file and executable file. Which file contains an address for the symbol, the object file or the executable file?
$ objdump -t binding.o | grep data_global_initialized_nonzero
$ objdump -t binding.exe | grep data_global_initialized_nonzero 

$ objdump -t binding.o | grep -w bss_global
$ objdump -t binding.exe | grep -w bss_global

$ objdump -t binding.o | grep -w text_func
$ objdump -t binding.exe | grep -w text_func

Can the symbols that start with stack_ and those stored in the heap be found?No. The stack section and heap section are allocated at run time.

Let us look where each of the sections start in memory and the symbols in each section.
$ objdump -t binding.exe | grep -w .text
$ objdump -t binding.exe | grep -w .data
$ objdump -t binding.exe | grep -w .bss

We will now use GDB to examine the process address space at run time. GDB will allow us to examine the state of the execution by allowing us to run one instruction at a time. (Try to compare the addresses at link time and at run time. Are they the same?)
$ gdb ./binding.exe
(gdb) set disassembly-flavor intel
(gdb) b main+99
(gdb) r
(gdb) disas main
(gdb) info proc mapping
   
Study the memory map. Notice that there is no heap section yet. This is because no call to malloc() has been made yet.
(gdb) ni +6
(gdb) disas main
(gdb) info proc mapping

The heap section is now present. Let us look for the variables in the sections.
(gdb) find 0x601000,+0x1000,"JACH_IN_DATA"
(gdb) find 0x601000,+0x1000,"JACH_IN_BSS"
(gdb) find 0x602000,+0x21000,"JACH_IN_HEAP"
(gdb) find 0x7ffffffde000,+0x21000,"JACH_IN_STACK_LOCAL"

How about the parameter?Is it in the stack?
(gdb) find 0x7ffffffde000,+0x21000,"JACH_IN_STACK_PARAM"

The string is not in the stack! It is in the text section! Traditionally however, parameters are pushed to the stack.
(gdb) find 0x400000,+0x1000,"JACH_IN_STACK_PARAM"

Finally, run the process to completion.
(gdb) c
(gdb) quit 

Conclusion

This post discussed some concepts in memory management in relation to C programs and Linux processes.

Figure 1. Sample Memory Map (no heap section yet)